Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015840556.1_cds_XP_016507658.1_20758
CDS Infomation

[gene=LOC107825322] [db_xref=GeneID:107825322] [protein=lysophospholipid acyltransferase LPEAT2-like isoform X2] [protein_id=XP_016507658.1] [location=join(61035..61513,62538..62718,62916..62975,63876..64039,64132..64195,65466..65534,66430..66525,67210..67254,68338..68408,76290..76356,78034..78084,79540..79650,80234..80371)] [gbkey=CDS]
Sequence

ATGTCGGACCACACTGTATCCGCTCCTCTTTTACCTTTCTCCACCCACCTCTCAGACTCC
GATCACGATCAGGCGCCTGAGCCGCACGTGATCGTTACTGTTGACGACGATGATGGGGTC
CACCAGCTACCCAACGGCGATGATCATCAATTGGTTACTCATATTTCGGAGGTGGATGAT
AACCCATATGCGTTTCTTGGAGCGAAACGGTTCGACATGCCTGGATCCACTACCGTTGAC
CCGTTCAGGAACAATACACCTAGAATCGAAGGGGTCTATGAATGGTTCAAGATTGTCGTG
TGTTTGCCACTTGCTTTGGTGAGGTTGTTGCTTTTTGGGTTGTCTTTGATGGTCGGTTAC
GTGGCGACACGTGTTGCTTTGTACGGGTGGAAAGATAAACACAATCCTATGCCTAAATGG
AGGTCCAGATTGATGTGTGTTACCCGGTCTAGTGCCAGAACCATCCTTTTCTCTTTCGGG
TACCAATGGATAAGACGAAAAGGAAAACCTGCACCAAGGGAGATAGCTCCCGTTGTTGTA
TCTAATCATGTCTCTTACATAGACCCTATCTTCTTTTTCTATGAGTTATTTCCTACCATT
GTTGCTTCCGAGTCCCATGATTCCATGCCTTTCGTCGGAACCATTATCAGAGCTATGCAG
GTGATATATGTTAATAGATTCTCTCCCACTTCAAGGAAGCATGCTGTTAGTGAAATAAAG
AGAAAGGCTTCTTGCAATCAATTTCCCCGAGTGCTTTTATTTCCTGAAGGGACTACAACC
AACGGAAGAGCTATTATTTCCTTTCAACTTGGTGCATTTATCCCAGGATATCCTATCCAG
CCTGTTATTGTGCGGTATCCCCACGTACACTTTGACCAATCATGGGGGAATGTTTCCCTT
GGAATGCTGATGTTTAGAATGTTCACTCAGTTCCACAATTTCATGGAGGTTGAGTACCTT
CCTGTTGTATCACCTCATGAGAATCAGAAAGAAAATGCTGTACGGTTTGCTCAAAGGACT
GGCCATGCTGTTGCAACTGCCCTTAATGTTGTACAAACATCTCATTCTTATGGCGATGTA
CTGCTTCTCGCTAAGGCATTGGAGGCCAATCAGGAAAATCCATCACTCTATTTTGTTGAG
ATGGCAGCGGTTGAAGCGGCATTTCATTTGAGCTCTTTGGAGGCTGTAGAGTTTCTGGAT
GTTTTCCTTTCAATGAACCCAGACTCCAAGGGACAGGTCGAGATTCAGGACTTCCTCAGG
GTTTTAAGACTGAAACCCTGTACTCTTTCTGAAAAGATGTTTGGCTTCACTGATATGCAG
AAGAGCGGTAAAATGACATTCAAGCAGTTTTTGGTTGGTTCAGCTCATATCTTGAAGCAG
CCATTGTTTCATCAAGCCTGTGAATCAGCCTTTACTGCATGTGGCGACGATGGGAAGAAC
TACATTCTGGAGCAAGAGATCCATGGACTCTTCACCTTGTTTGATACAGATCATGATGGG
AAGATCAGCAAGGCCGATTTGATCGCCTGCTTAAGAAGATATCCTTTGTTGATTGCCCTT
TTCTCACCTTGTTTATTGCAACAAACTTGCCCATAG

Peptide Sequence

PEP ID

XP_016507658.1
PEP Infomation

PREDICTED: lysophospholipid acyltransferase LPEAT2-like isoform X2 [Nicotiana tabacum]
Sequence

MSDHTVSAPLLPFSTHLSDSDHDQAPEPHVIVTVDDDDGVHQLPNGDDHQLVTHISEVDD
NPYAFLGAKRFDMPGSTTVDPFRNNTPRIEGVYEWFKIVVCLPLALVRLLLFGLSLMVGY
VATRVALYGWKDKHNPMPKWRSRLMCVTRSSARTILFSFGYQWIRRKGKPAPREIAPVVV
SNHVSYIDPIFFFYELFPTIVASESHDSMPFVGTIIRAMQVIYVNRFSPTSRKHAVSEIK
RKASCNQFPRVLLFPEGTTTNGRAIISFQLGAFIPGYPIQPVIVRYPHVHFDQSWGNVSL
GMLMFRMFTQFHNFMEVEYLPVVSPHENQKENAVRFAQRTGHAVATALNVVQTSHSYGDV
LLLAKALEANQENPSLYFVEMAAVEAAFHLSSLEAVEFLDVFLSMNPDSKGQVEIQDFLR
VLRLKPCTLSEKMFGFTDMQKSGKMTFKQFLVGSAHILKQPLFHQACESAFTACGDDGKN
YILEQEIHGLFTLFDTDHDGKISKADLIACLRRYPLLIALFSPCLLQQTCP

Transcript Sequence

Gene sequence data has not been registered.